Yiliang Ding, John Innes Centre, Norwich, UK
RNA Structure: An Important Regulator in Living Cells
24.1.2024 SoMB Invited External Seminar Hosted by Matt Jones
More about Yiliang Ding linked here
Some of the papers mentioned in the talk:
Y Zhang, M Yang, S Duncan, X Yang, MAS Abdelhamid, L Huang, ... G-quadruplex structures trigger RNA phase separation Nucleic Acids Research 47 (22), 11746-11754, 2019
Y Ding, CK Kwok, Y Tang, PC Bevilacqua, SM Assmann Genome-wide profiling of in vivo RNA structure at single-nucleotide resolution using structure-seq Nature protocols 10 (7), 1050-1066, 2015
X Yang, J Cheema, Y Zhang, H Deng, S Duncan, MI Umar, J Zhao, Q Liu, ...RNA G-quadruplex structures exist and function in vivo in plants Genome biology 21 (1), 1-23, 2020
K Kwok, Y Ding, Y Tang, SM Assmann, PC Bevilacqua Determination of in vivo RNA structure in low-abundance transcripts CNature Communications 4 (1), 2971, 2013
Y Ding, Y Tang, CK Kwok, Y Zhang, PC Bevilacqua, SM AssmannIn vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features Nature 505 (7485), 696-700, 2014
Y Zhang, M Yang, S Duncan, X Yang, MAS Abdelhamid, L Huang, ...G-quadruplex structures trigger RNA phase separation Nucleic Acids Research 47 (22), 11746-11754, 2019
M Yang, P Zhu, J Cheema, R Bloomer, P Mikulski, Q Liu, Y Zhang, ... In vivo single-molecule analysis reveals COOLAIR RNA structural diversity Nature 609 (7926), 394-399, 2022
Z Liu, Q Liu, X Yang, Y Zhang, M Norris, X Chen, J Cheema, H Zhang, ... In vivo nuclear RNA structurome reveals RNA-structure regulation of mRNA processing in plants Genome Biology 22 (1), 1-22, 2021
M Norris, CK Kwok, J Cheema, M Hartley, RJ Morris, S Aviran, Y Ding FoldAtlas: a repository for genome-wide RNA structure probing data Bioinformatics 33 (2), 306-308, 2017